BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035D06LP1|AL430042
(951 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1700 1784 0.0
>3x_Contig1700
Length = 16332
Score = 1784 bits (895), Expect = 0.0
Identities = 934/951 (98%), Gaps = 1/951 (0%)
Strand = Plus / Plus
Query: 1 taaccagactaatcgcattttctcctctaattctacatctgctaataccacgaactatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5817 taaccagactaatcgcattttctcctctaattctacatctgctaataccacgaactatca 5876
Query: 61 gtacagtaataataacaatttgcagcaggcctatcaccctgccgtccccgtgcattcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5877 gtacagtaataataacaatttgcagcaggcctatcaccctgccgtccccgtgcattcaat 5936
Query: 121 cgatagaatgcaacattataaacaattgcataacttgcagcagttacaaatgctgcaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5937 cgatagaatgcaacattataaacaattgcataacttgcagcagttacaaatgctgcaagt 5996
Query: 181 caaacttcaagctcaaacccaaaacctttctcacaatatacagccttcaacggccctgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5997 caaacttcaagctcaaacccaaaacctttctcacaatatacagccttcaacggccctgca 6056
Query: 241 gcctttaaacattcgaactggtgaagattccttctcaaamttcaaagaamacaataccca 300
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 6057 gcctttaaacattcgaactggtgaagattccttctcaaccttcaaagaacacaataccca 6116
Query: 301 tgarmaacagcttctttccaatcctaataacgggcgtgaccaagatcatgatcaacaaca 360
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6117 tgagcaacagcttctttccaatcctaataacgggcgtgaccaagatcatgatcaacaaca 6176
Query: 361 gcaacagttgactcatgatggcgtaccacacgaatcgcatcactcgtaccagtgtcatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6177 gcaacagttgactcatgatggcgtaccacacgaatcgcatcactcgtaccagtgtcatct 6236
Query: 421 atgttagaaacaattcagacgaaaatcttggttaaagagacatcttctgtctcattcaaa 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6237 atgtgagaaacaattcagacgaaaatcttggttaaagagacatcttctgtctcattcaaa 6296
Query: 481 cgtgaaaaagtttcattgcccatggtgttcatccacacataaacgtaaggacaacttgaw 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6297 cgtgaaaaagtttcattgcccatggtgttcatccacacataaacgtaaggacaacttgct 6356
Query: 541 tcaacawtwaaaactgaagcacaaaaartatctcctacacgaattcacgttgtttggtat 600
|||||| | |||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct: 6357 tcaacatttaaaactgaagcacacacagtatctcctacacgaattcacgttgtttggtat 6416
Query: 601 actgatgaatgtaaacaacgggtctggtaatactgccaacttggtaaccacaagcactgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6417 actgatgaatgtaaacaacgggtctggtaatactgccaacttggtaaccacaagcactgg 6476
Query: 661 tgagacaatttgtctaatcaacaatgaaccctcaacaaccatcagagacatgttggattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6477 tgagacaatttgtctaatcaacaatgaaccctcaacaaccatcagagacatgttggattc 6536
Query: 721 aaacgctttgcccaaggaccaggtgaaaagatgtgtgaattatatagtagatagcaagtg 780
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6537 aaacgctttgcccaaggaccaggtgaaaagatgtttgaattatatagtagatagcaagtg 6596
Query: 781 tagctaacaccgcgttggtagtatcatgtaacaattatttagtaatctccattcgaagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6597 tagctaacaccgcgttggtagtatcatgtaacaattatttagtaatctccattcgaagaa 6656
Query: 841 acacagacagggtctgttacattttttatactgacaaatatcatacataataagaaataa 900
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 6657 acacagacagggtctgttaca-tttttatactgacaaaaatcatacataataagaaataa 6715
Query: 901 aatggtatataacctctcctcatactagttcaaagcatgtctctcacaacc 951
|||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 6716 aatggtatataacctctcctcatactagttcaaagcatgtctctaacaacc 6766
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6553
Number of Sequences: 1807
Number of extensions: 6553
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)